Resources

Resources

Efficient Data Storage and Access for TIMS-TOF IMS-DIA datasets
https://github.com/michalsta/opentims
https://github.com/MatteoLacki/timspy
https://github.com/MatteoLacki/timsr

In collaboration with Bruker and Dr. Michał Startek from the University of Warsaw we developed a collection of software tools called opentims, timspy and timsr for easy access to timsTOF data. These tools are free of charge.

Reference:
Łącki MK, Startek MP, Brehmer S, Distler U, Tenzer S. OpenTIMS, TimsPy, and TimsR: Open and Easy Access to timsTOF Raw Data. J Proteome Res. 2021 Mar 16. doi: 10.1021/acs.jproteome.0c00962. Epub ahead of print.